BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C08SP1|AL430368
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1182 1819 0.0
>3x_Contig1182
Length = 5590
Score = 1819 bits (917), Expect = 0.0
Identities = 928/931 (99%), Gaps = 1/931 (0%)
Strand = Plus / Minus
Query: 1 gatcacacatttgctgtgcactttgtgtgattctagaagacacttgatcggtagctggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5295 gatcacacatttgctgtgcactttgtgtgattctagaagacacttgatcggtagctggca 5236
Query: 61 agttggcgaacaagaacaacatgttcaaggcatcgtccacatctctcaaggcatcagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5235 agttggcgaacaagaacaacatgttcaaggcatcgtccacatctctcaaggcatcagcaa 5176
Query: 121 aagatggataacgttccttgatgatattatctaattgatagttaggtctgttctcttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5175 aagatggataacgttccttgatgatattatctaattgatagttaggtctgttctcttcca 5116
Query: 181 atctcttagctgctgacacttctcctctccctagagccttagtcaactttttagcaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 atctcttagctgctgacacttctcctctccctagagccttagtcaactttttagcaaaag 5056
Query: 241 tcttatgttctctgaacttggccaatacaggctcatgcatcaaatactgaatatccttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 tcttatgttctctgaacttggccaatacaggctcatgcatcaaatactgaatatccttat 4996
Query: 301 aataatagaaagtggtaggagccgtagatcctttattagccttcttcttattcctaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4995 aataatagaaagtggtaggagccgtagatcctttattagccttcttcttattcctaggtt 4936
Query: 361 ctctggggtaaatacccttgaagatacacaatcttctaaaatcagctaaagagatctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4935 ctctggggtaaatacccttgaagatacacaatcttctaaaatcagctaaagagatctgta 4876
Query: 421 gtttacgaacggcctgagacctggtaatgaagtttctagcattacctctggtatttctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4875 gtttacgaacggcctgagacctggtaatgaagtttctagcattacctctggtatttctct 4816
Query: 481 tcttaattctcatcttgaacaaaaaaaagtatctctccttgtctagttagttagctatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4815 tcttaattctcatcttgaacaaaaaaaagtatctctccttgtctagttagttagctatct 4756
Query: 541 tttaaacctgaacctggaagattactctagcttatcaaattgaatcactttataacttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4755 tttaaacctgaacctggaagattactctagcttatcaaattgaatcactttataacttaa 4696
Query: 601 ctagaaccaccaaagacaagctatcgagatagcaattgtctattcaatcattcattgtac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4695 ctagaaccaccaaagacaagctatcgagatagcaattgtctattcaatcattcattgtac 4636
Query: 661 gtataataagtgatgtatgtgcaatttgtatttgaagctcatcgcatctcatcgcatctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4635 gtataataagtgatgtatgtgcaatttgtatttgaagctcatcgcatctcatcgcatctc 4576
Query: 721 gaaaacgaaaattttcagaaattgaaaaagaaattatcaatcacgtgatacaaatattca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4575 gaaaacgaaaattttcagaaattgaaaaagaaattatcaatcacgtgatacaaatattca 4516
Query: 781 gacttaagttgactacatcccaaaaggggaatatttggggcacaatatcaaaaccgtaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4515 gacttaagttgactacatcccaaaaggggaatatttggggcacaatatcaaaaccgtaca 4456
Query: 841 agatgagtttctgaatttattcacgtgatcattaaaatgtttaattacagcttgcacgtc 900
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4455 agatgagtttctgaatttattcacgtgatcattagaatgtttaattacagcttgcacgtc 4396
Query: 901 ggaaatgtaaagaaagg-tycttattctgac 930
||||||||||||||||| | |||||||||||
Sbjct: 4395 ggaaatgtaaagaaaggttccttattctgac 4365
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8752
Number of Sequences: 1807
Number of extensions: 8752
Number of successful extensions: 167
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)